PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pahal.C04322.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
Family bZIP
Protein Properties Length: 568aa    MW: 60290.2 Da    PI: 6.3642
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pahal.C04322.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.43.6e-14115174362
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                     e kr  r+ +NRe+A  sRqRKk+++eeLe kvk+++a   +L  +++  + e   lk++
  Pahal.C04322.1 115 EAKRRARLVRNRESAHLSRQRKKQYVEELEGKVKAMQATIADLSARISCVTAENTVLKQQ 174
                     78*********************************************9999999888887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-13112177IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.002115175IPR004827Basic-leucine zipper domain
PfamPF001709.1E-13115175IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-13117175No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-16117175No hitNo description
CDDcd147042.82E-21118168No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    Send to blast
MAEPTLLAPD PFADLPFPEF QAPVDGGNFA FEDFDLEDLD LDVDFDLDLF ASDGQLSQPP  60
PLATSSSTAG SPEGGSSSSG AGGDGGLRNE ESSESCSRSA SVTDGSGKGK GEDDEAKRRA  120
RLVRNRESAH LSRQRKKQYV EELEGKVKAM QATIADLSAR ISCVTAENTV LKQQLGGAAG  180
TAPPLPMYPA VYPLPMPWMH PAYAMRGSQV PLVPIPRLKP QQPAPATAEP PAKKARKTKK  240
VASVSLLGLL CLVMLCGCLI PAVNRMYGSV DGGEGAAFGP SHHGRVLAVE GPRDSVSDSI  300
DPKPPQSTSE TLPALLYLPK NGKHVKINGN LVIKSIVASE KASLRMSGYD GKSPRNQGKE  360
ETSLAIPGYV ASLEAGEVMD STTGMKNKPM ALAPADGNMY REDDGLLPQW FSEAMSGPLL  420
SSGMCTEVFQ FDVSPSSAHA NGIVPVYSNA MPNSMQNFTE NLPSAHPHTV KNRRISYSEA  480
IPLRGSTSNN TERLKTPPKN ESFGSMKPVS SVVVSVLADP REVGEGNGEG RISSKSLSRI  540
FVVVLIDSVK YVTYSCVLPF KNHSPHL*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9739380.0EU973938.1 Zea mays clone 424664 DNA binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002461117.10.0hypothetical protein SORBIDRAFT_02g041070
TrEMBLC5X3Z40.0C5X3Z4_SORBI; Putative uncharacterized protein Sb02g041070
STRINGSb02g041070.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP111793035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.14e-70bZIP family protein